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Every frame, the model is queried to find what's in play, a custom physics engine is updated to reflect the results and a renderer draws the current state to the screen.
These known items form the start points in the model; the model is queried to provide the possible paths from the start points to required information.
The probabilistic nature of the model allows for a precise formulation of retrieval, in which the model is queried with the differential expression in gene sets of an experiment and it returns a ranked list of relevant experiments.
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The resulting model was queried against a sixframe-translated assembly using CAP3 [30] of M. faveolata ESTs [5].
The model was queried to identify those nodes whose inactivation under conditions of constant EGF would result in pRb dephosphorylation and consequent G1 cell cycle arrest (resulting in restoration of Trastuzumab sensitivity).
Three thousand eighty seven HMM models were queried against SCOP-NrichD database [ 23] using hmmsearch [ 28].
The focus of this article is to use system-level models for generating and using expectations to generate attentional modulation: given a search cue, e.g., a certain object identity, system-level models are queried for features correlated with this identity, and the resulting expectation is used to define attentional modulation.
According to the company website, "Empirical is an analytics engine that automatically models structured, tabular data (such as spreadsheets, tables, or csv files) and allows those models to be queried to uncover statistical insights in data".
A few peptide peak lists that failed to match C. lunatus m118 v2.0 model genome peptides were queried against all updated entries from the NCBInr and Fungi MSDB sequence databases via in-house MASCOT server (v.2.3 MatrixScience, London, UK) using identical search parameters.
Finally, Additional file 1 contains a user guide to the archeomagnetic/volcanic query form and a description of the global Holocene geomagnetic field models that can be queried through the database interface.
Our ultimate, long-term goal is to generate in silico models that can be queried to identify biomechanical treatments that will optimize the wound healing process in the vocal folds, as a function of patient-specific inflammatory profiles.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com