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An intramitochondrial recombination process is invoked to model gene inversion (Dowton and Campbel 2001).
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In total, in the course of the 19 steps required under the PGD model, gene 12 undergoes inversion 19 times; gene 14 is inverted 17 times, gene 16 is inverted 15 times, and so on (see Additional File 3).
** one gene inversion indicates the inversion event of one gene.
Among the mt gene orders found in Hexacorallia there have been no gene inversions, but there has instead been extreme shuffling of genes, changes that are typically explained by a model of gene duplication followed by random loss.
The duplication/random loss model that is frequently invoked as the primary mechanism underlying changes in mitochondrial gene order in metazoans (Boore 2000) cannot account for gene inversions.
The majority of rearrangements occurred through gene inversions (12 inversions of 17 rearrangements, fig. 2) between Bangiophyceae and Hildenbrandiophycidae, and between Hildenbrandiophycidae and Nemaliophycidae.
This technique may also identify fusion genes, inversions and translocations.
They obtained a relatively accurate velocity model by inversion.
Finite-source model from inversion of teleseismic waves.
Probabilistic methods of rearrangement only model inversions [ 23, 24] or inversions and transpositions [ 25].
Here, we review advances in modeling and gene correction of SVs, focusing on inversion, translocation, and nucleotide repeat expansion.
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