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The distributions of commuting distances for both Shenzhen and Huangshan are considerably more local than those from western counties (UK, US [17], [18], see Figure 8), where power laws or exponential distributions have been used to model distance distributions [4], [8], [10], [19].
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To address this limitation we assess our model's performance using distance distributions between the predicted and true mature miRNAs for each precursor sequence, as detailed below.
To check this evolutionary model, we further compared the PAM distance distributions for orthologous genes located either inside synteny blocks (the so-called POGs) or outside these blocks.
Also shown are the predicted R1 R1 distance distributions obtained from the homology model.
Panels from left to right: location of spin-labeled pairs on BmrCD homology model, baseline-corrected DEER decays along with the fits and the resulting distance distributions.
The distance distributions were obtained using GNOM [33], and further used for ab initio modelling in DAMMIN [34].
Exact distances and distance distributions are desirable when solution measurements must be compared to crystal structures, generally to distinguish between models of how a particular protein or nucleic acid functions.
Distance distributions of genomic regions within the HoxB locus.
Fig. 4 Median distance distributions.
Shortest path distance distributions were computed.
Pulse EPR measurements were used to determine distances and distance distributions across the cytoplasmic or periplasmic ends of OxlT and were compared with the predictions of an inside-open homology model.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com