Exact(3)
Li-Wong model based index was used as probe set summary measure [107].
Gene expression index calculation was done using model based index calculation (MBEI) by Li & Wong [50].
Under this approach with k = 2, Guggenmoos-Holzmann [ 22, 23] provided a simplified formula to estimate alpha, which is given by: α ^ = 1 - 1 x 11 x 22 / x 12 x 21 P O Andrés and Marzo [ 17] proposed a different kind of model based index they called 'delta,' based on a multiple-choice test that measures "proportion of agreements that are not due to chance".
Similar(57)
Song, L., Langfelder, P. & Horvath, S. Comparison of co-expression measures: mutual information, correlation, and model based indices.
As this study is primarily concerned with assessing the performance of the model based indices however, we leave that work to others (i.e. Arpaci et al., 2013).
Li and Wong modelled probe level data to generate model based expression index (MBEI) and implemented it in the dChip software [ 2].
The most popular methods for calculating expression indices include Affymetrix Microarray Suite 5 (MAS5) [ 1], model based expression index (MBEI) [ 2] and robust multi-chip average (RMA) [ 3].
The data was then loaded into the Gene Traffic Microarray Analysis program where it was normalized using the invariant set command, using the Clark 100 uM Fe as the control group, and a model based expression index (MBEI) [ 44] analysis was performed on perfect match probes only.
Our simulation demonstrated that the 3D model based on index-function model of LBM is a suitable tool for 3D numerical simulation of rising bubbles in the presence of obstacles.
The paper then proposes the use of model predictive control (MPC) using the previously introduced model based cheap-control index.
Our model based on vegetation indices and topographic variables was consistent with our exploratory analysis (Figure 4).
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