Sentence examples for model backbone from inspiring English sources

Many of these achievements employed methodologies that sample amino acid side-chains on a fixed backbone, while methods that explicitly model backbone flexibility have so far largely focused on the design of new structures rather than functions.

All GNF-Pf4492-associated GNF-Pf4492-associated GNF-Pf4492-associated helices 1 and 2 (mutationskbonexceptred orange) and corresPro990Arg occurredreported KAE678 resinTMnce-conferring mutations: Ala184Ser (yellow), Ile203Met (yellow; identical location of GNF-Pf4492 mutation), and Gly223Arg (yellow).

An initial model was generated as described in the Materials and Methods section and assessed by visual examination of the model to look for obvious structural inaccuracies and by computation of the model RMSD, which is a quantitative scalar measure of the generated model backbone's fit relative to the template backbone.

Concrete examples include computing minimal unsatisfiable subsets, minimal correction subsets, prime implicates and implicants, minimal models, backbone literals, and autarkies, among several others.

However, Rd.HMM is very sensitive to the conformational features of the models' backbone.

In particular, this method optimizes the side chain conformations in the interface, models backbone movements, minimizes the relative orientations of the molecules and ranks the refined solutions by a binding energy scoring function [29].

values between all modelled backbone atoms is 0.48 Å, and 0.4 Å if only the transmembrane domains are compared.

We evaluate this model of backbone flexibility using three different tests.

Figure 5 Network evolution with terminal nodes moving according to the RPGM model and backbone reacting using the FORCE algorithm.

Application of this simple model of backbone motions may significantly improve both protein design and atomistic simulations of localized protein flexibility.

We model the backbone of the wireless mesh network (WMN) R as a directed graph G = (V, E) where V represents the set of client nodes in the network and E represents set of directed links.