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For the other three methods, the SA model assumed equal contribution of all neighbors.
The simulated mutational model assumed equal probability of mutating to any allelic state (KAM).
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The ordered logit model assumes equal relationship between each pair of injury severity levels, but this proportional odds assumption may be violated by all or part of the explanatory variables and hence may be relaxed in order to avoid incorrect, incomplete or misleading results.
In other models, the model assuming equal variance between sexes fitted the data best.
Sequences were evolved under the Jukes-Cantor nucleotide model assuming equal frequencies for all nucleotides, with an equal transition-transversion ratio.
In all models except the model for 2D:4D, the model assuming equal residual variance by age and sex fitted the data best.
eWeighted average, because model assumes equal mortality due to lack of significant mortality difference (linezolid = 63 of 224; vancomycin = 59 of 224).
A model assuming equal effective population sizes between the pied flycatcher and the ancestral flycatcher (ABBXX) was also rejected if the rate of post-divergence gene-flow was forced to be equal in both directions (ABBDD), but not otherwise (ABBDE).
Briefly, we tested the null model assuming equal ω across branches and several nested models allowing for different ω ratios for particular groups of branches and compared the log likelihoods under these models with a likelihood ratio test [LRT, [ 19]].
In contrast to the above one-parameter model assuming equal methylation gain and loss rate, Slatkin's model uses two parameters to describe the rates of gain and loss, respectively.
The final model, displayed in Additional file 2, was found to be statistically significant compared to a model assuming equal choice shares at the α=0.05 level (χ = 291.1*, df =13).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com