Sentence examples for model annotations from inspiring English sources

We used FlyBase version 5.16 for gene model annotations (Tweedie et al. 2009), giving a total of 14,072 annotated protein-coding genes.

Identified A-to-I editing sites are annotated on the genome and are viewable in relation to gene model annotations on GBrowse.

Finally, our database establishes links from model annotations into bio-ontologies.

The –GTF option was used to provide Tophat with a set of gene model annotations.

Logistic regression was applied in order to model annotations as variables that influenced trait-association status of SNPs.

Finally, the Seq-atlas also provides a means of evaluating existing gene model annotations for the Glycine max genome.

It should be noted that the annotation process that produced the predicted peptide sets queried here were not independent since more recent annotations often train their gene model annotation pipeline on gene models from previously annotated genomes e.g. [17].

The virtual parts used to build models are annotated with additional annotations that are not normally associated with synthetic biology model annotation.

We used the gene model annotation provided in the form of a.gff file distributed by TIGR [8], from which we identified 62,121 gene models (mRNA transcripts), including 13,467 that were TE-related.

Model annotation standards include the Minimum Information Required in the Annotation of Models (MIRIAM) [ 13].

Model annotation needs to be, and indeed is, a continuous process.