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Therefore, no Protein ID is available and the TIGR gene model accession is given instead.
For example, the Gene ID is linked to the NCBI Gene page for that gene; the model accession number is a link to the MAPPER page describing that model, and the absolute hit position is a link to the UCSC Genome Browser. Figure 2 shows a typical result page for a single-gene rSNP-MAPPER run.
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The tertiary structures were predicted via the "c3b9bA" model (PDB Accession Code: 3B9B) in P-ATPase 13A1 family and "c2zxeA" model (PDB Accession Code: 2ZXE) in P-ATPase 13A3 family.
The six frame translation of the tammar genome (assembly 1.0) was searched for homeobox domains using a profile hidden Markov model (Pfam accession PF00046.21) and the HMMer software (version 2.3.2) [ 52].
The protein structure was solved by molecular replacement with PHASER (McCoy et al, 2005) and the open C-loop structure of Ac-AChBP as the search model (PDB accession code 2C9T).
The model Y = accession + block + error, with accession and block as a random effects, was used to obtain the variation due to genotype (accession) and total (accession + block + error) variance.
More generally, however, it is becoming increasingly clear that the EU needs to develop a new accession model for the western Balkan states.
To achieve the task we design an endogenous growth model of an accession economy with special features.
Here, we used their best approximating model with the accession number of MODEL1209110001 in Biomodels Database [ 5].
To test for marker-trait associations we first applied an approach that did not include any correction for the level of relatedness or structure between accessions (model 1).
Our search yielded two grape close homologues in the grape genome version 12x: the annotated gene models GSVIVT01008005001 (protein accession ABK59040) and GSVIVT01029904001 (protein accession ACF21938).
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