Your English writing platform
Discover LudwigSuggestions(2)
Exact(21)
For instance, the Affymetrix MAS 5.0 software (Microarray Analysis Suite version 5.0) uses the difference (IPM - IMM) as estimator of the specific signal; an adjusted MM intensity (ideal MM) is used in the case the MM intensity exceeds the PM signal [ 4].
Parametric images of K s, K s ( c ), and K m were generated for visual comparison after filtering of the DTP image data with a bilateral filter [16] (spatial filter width 9 mm, intensity filter width 2.5 SUV).
Image data were then post-processed with a Gaussian MAF (FWHM: ΓM = 7 mm) and a Gaussian BF (spatial domain: ΓS = 9 mm, intensity domain: ΓI = 2.5 SUV), respectively.
The value for each probe pair was calculated by subtracting the mismatch (MM) intensity from the perfect match (PM) intensity.
X-ray tomographical images have been made for all samples using a multi-slice spiral CT-scanner (CT-scan Brilliance 64 slice, Philips, The Netherlands) with the following characteristics: collimation: 20×0,625 mm; slice thickness: 0.7 mm; reconstructed slice interval: 0.35 mm; intensity: 330 mAs; tension: 140 kV; X-tube rotation time: 0.75 s; reconstruction filter: B-standard.
However, studies indicated that although MM might help to remove the non-specific signal intensity to some extent, as many as 30% of MM probes had intensities higher than their corresponding PM probes, thus defeating the purpose of using the MM intensity to adjust the PM intensity [27], [38].
Similar(39)
Principles of physical-chemistry impose some constant value for the average ratios of PM and MM intensities.
The detection algorithm uses probe pair (includes perfect-match (PM) and mismatch (MM)) intensities to generate a detection p-value and assign a Present, Marginal, or Absent call.
In this case, MM intensities were not used.
We found that MM intensities exceeded PM intensities less frequently when we used sscDNA as compared to cRNA.
This was consistent with results of the comparison between PM and MM intensities of the Nipponbare genome when the log10 intensities of PM probe were above 2.5.
Write better and faster with AI suggestions while staying true to your unique style.
Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com