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ML was supported by the Ministère de l'Enseignement Supérieur et de la Recherche (AC).
ML was supported by the Sewankambo Scholar Program at IDI funded by Gilead Foundation.
ML was supported by a Wellcome Trust Fellowship (WT093855MA) and the Austrian Science Fund (J2856).
ML was supported by fellowships from the Ministère de l'Education et la Recherche, the AFM and EuroSyStem.
The salary of ML was supported by the grant from the Centro Studi Termali Veneto, Pietro d'Abano di Abano Terme e Montegrotto.
The Hawaii Tumor Registry is supported by Contract N01-261201000037C-3-0-1. ML was supporteduringng the work on this project by a postdoctoral fellowship on grant R25 CA90956.
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ML is supported by the UK Alzheimer's Society.
ML is supported by a National Health and Medical Research Council postgraduate scholarship.
CIK, MMSY, JB, and ML were supported with funding from Genome Canada, Genome British Columbia, and Genome Alberta (Tria 1 and Tria 2 projects, http://www.thetriaproject.ca) and the Natural Sciences and Engineering Research Council of Canada (NSERC, Discovery Grant, Strategic Project Grants, and an E.W.R. Steacie Memorial Fellowship to JB).
We found the most frequent ML tree was supported and not significantly different from the gene's ML tree for 69.23% (1593 of 2301) of nuclear genes having no evidence of positive selection (called here neutral genes).
The pre-publication history for this paper can be accessed here: http://www.biomedcentral.com/1471-2318/13/94/prepub ML's time was supported in part by the Arizona Area Health Education Centers Program.
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