Sentence examples for mixed sequence reads from inspiring English sources

The assembly of multiple genomes from mixed sequence reads is a bottleneck in metagenomic analysis.

MetaVelvet-SL constructs a de Bruijn graph from mixed sequence reads of multiple species genomes using Velvet functions.

In oilseed rape, several types of mixed sequence reads from homoeologous loci are usually aligned to the same position on the pseudo-reference sequence.

An important step in metagenomic analysis is the assembly of multiple genomes from mixed sequence reads of the multiple species that exist in the sample.

To mine allelic variants from mixed sequence reads (mixed alleles) at the same position, we first designated the alleles as A1, A2, A3 etc.

The fundamental concept used in MetaVelvet is that a de Bruijn graph constructed from mixed sequence reads of multiple species is considered to be equivalent to the union of multiple de Bruijn sub-graphs, each of which is constructed from sequence reads of individual species.

"Mixed fragments" are sequence reads containing a sample identification tag of one sample at one end and the sample identification tag of another sample at the other end (Fig. 5).

Since the raw sequence reads mixed non-cp DNA from the nucleus and mitochondria, we isolated the cp sequence reads from the raw sequence reads based on the known cp genome sequences.

In that in silico simulation, the authors randomly sampled sequence reads from 113 isolate genomes, and mixed them to create three "communities" of varying complexity.

Here, we used a mixed strategy, by mapping the reads to wheat-ESTs and assembling of unmapped sequence reads.

Next, we compiled mixed datasets for testing the read-mapping pipeline, by randomly sampling subsets of these simulated sequence reads.