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The four data sets (PV_Sep, Me_Sep, PV_Joint and Me_Joint) were filtered for increasing levels of allowed missing values, excluding SNPs whose missing rate over genotypes was greater than a fixed thresholds of 10, 20, 30, 40, 50 and 70%%.
Of these, one (0.5 %) patient had primary hyperparathyroidism, eight (4 %) patients had evidence of acute kidney injury and seven (3 %) patients had missing values, excluding them from analyses.
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Each of models is specified in full below, according to how missing data were dealt with: Missing values excluded Missing values set to minimum Missing values set to maximum Missing values imputed at mean Note: 'Other' stroke syndrome is defined as those individuals whose clinical syndromes could not be assigned to one of the four OCSP syndromes.
From the total group of adolescents were included all (N = 4647) that answered the question corresponding to having or not having a long term disease or health problem that has been diagnosed by a doctor (missing values excluded).
Missing values excluded
Missing values excluded.
* Missing values excluded from % calculation.
1) Missing values excluded from the denominator.
* p-values computed using Fisher's exact test, with missing values excluded.
The primary analysis of viral suppression will be intent-to-treat, with missing values excluded.
*From χ test P=0.69 for difference between epochs (missing values excluded).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com