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Fig. 3 Residual mismatch distributions.
We calculated mismatch distributions in DnaSP.
Conversely, stable populations tend to show multimodal "ragged" mismatch distributions [37].
In this respect, relevant results emerge from the mismatch distributions (Figure 2).
We first checked mismatch distributions between the putative parents and the nestlings.
The mismatch distributions (data not shown) also support this hypothesis as well as the raggedness r index (Table 1) indicating that the mismatch distributions are unimodal and then compatible with population expansion.
Yet, another molecular mechanism may also be involved in the shape of the mismatch distributions observed for HLA genes.
Range expansion events have been dated by calculating Tau = 2 µt [69] based on mismatch distributions generated by ARLEQUIN [53].
We also detected signatures of rapid population expansion for all these young populations based on mismatch distributions.
We calculated mismatch distributions for population expansion in Arlequin using the groups identified in the SAMOVA analyses.
However, it may be inadequate for some haplotypes (about 1% in our study) because the two mismatch distributions overlap.
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