Sentence examples for misassembled sequence from inspiring English sources

However, it is not possible to confidently and correctly annotate a gene in an assembly with missing, wrong or misassembled sequence.

Currently, the program is mainly limited by incomplete or misassembled sequence data, but allows facile constant surveillance of newly sequenced genomes for DGRs.

The map also detected several regions of misassembled sequence, including a plasmid that was integrated into the chromosomal sequence among the assembled contigs.

However, there are several limitations inherent to the alignment process, including alignment to repetitive regions, absent or misassembled sequence in the reference genome, and individual genetic divergence between the subject organism's genome and the reference genome [ 1].

The newly found protein sequences underwent a visual verification process to remove redundancy and misassembled sequences.

Using the canine sequence as the basis for mVISTA comparative analysis [ 64], the region between the PIGT and WFDC2 genes was examined using the available genome assemblies - which have variable sequence coverage, contain gaps and may contain misassembled sequences.

High-quality sequences were obtained for >99% of known meningococcal genes among the de novo assembled genomes and four resequenced genomes and less than 1% of reassembled genes had sequence discrepancies or misassembled sequences.

Finally, there is always a chance that phrap has misassembled similar sequences, such that a primer pair suggested from a contig has no identical spacing or even identity in the genome.

These false positives were misassembled because of sequence homology along with sequencing errors, SNPs and indels.

It is possible for abundances of a given transcript to be falsely low in a sequenced library due to poor quality sequence, insufficient sequence depth, misassembled Unitrans or misidentification of the best organism match for a Unitrans due to sequencing/assembly errors.

NE locus regions identified as potentially misassembled or containing sequencing errors were resolved by capillary sequencing of PCR products.