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However, the advantage of sample concentration with larger input volumes outweighs any slight reduction in efficiency, especially for minority detection, where larger input volumes offer the possibility of improved sensitivity of detecting the minority variant [ 24].
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First, only a minority of detections rely on matching a new crime-scene DNA profile loaded to the database with a stored DNA profile from an individual: the rest match newly added individual profiles to stored crime-scene DNA profiles and will not be affected by the proposed changes in the law.
Even though they cannot be used on moving individuals, as in Minority Report, iris detection devices are used at border agencies all over the world, and were in use at Manchester and Birmingham airports until relatively recently.
However, on the whole data analysis seemed to lead to a minority of outbreak detections, with both formal and informal notifications of alerts playing a more prominent, though less timely role.
Method II allowed more sensitive detection of minority alleles than Method I. Less than 2% was detectable for the SNPs rs1042713 ADrs104271942719 andB2 and rs5351 EDNRB, and less than 9% was detectable for the SNPs rs4331 ACE, rs5925 LDLR, rs5930 LDLR and rs1433099 LDLR (Table 2).
Deep sequencing affords multiple advantages over current sequencing techniques for the detection of minority HIV variants.
Finally, the detection of minority K219Q and T215Y mutants in subjects 6 and 7, respectively, led to consistent decreases in predicted viral susceptibility to different NRTIs.
No changes in predicted susceptibility were observed for tipranavir or raltegravir, although detection of minority G140S in subject 3 suggested improved fitness of the Q148R mutants detected by population sequencing at virological failure (Table S1).
In conclusion, we have developed optimized UDPS protocols that have decreased the UDPS error rate and thereby increased the sensitivity for detection of minority HIV-1 resistance mutations and viral variants.
Furthermore, a partially denaturing HPLC (pDHPLC) assay was developed to detect a large range of sequence variants with high sensitivity and low detection limits for minority alleles which could be a useful approach for routine detection of EGFR variants [ 58].
On one hand, detection of additional minority drug-resistant mutants could improve the assessment of viral susceptibility to drugs with intermediate or high drug genetic barrier.
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