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Data streams require fast and real time processing to keep up with the high rate of data arrival and mining results are expected to be available within short response time.
The complete literature mining results are available in a searchable database on our website http://carrier.gnf.org/publications/Py. (follow the "literature database" link, also Table S3, S4).
Text mining results are then used to find the association between genes/pathways and thyroid cancer subtypes.
A related topic is that of random molecular networks, which serve as benchmarks against which data mining results are measured.
In data preprocessing, different techniques are applied to improve data quality such that the mining results are more accurate and better interpretable.
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The text mining results were compared to this reference set.
Knowledge extraction from data mining results is illustrated as knowledge patterns, rules, and knowledge maps in order to propose suggestions and solutions to the case firm for new product development and customer relationship management.
Knowledge extracted from data mining results is illustrated as knowledge patterns and rules on a product map in order to propose possible suggestions and solutions for product design and marketing.
The incorporation of context-aware data preprocessing to improve mining results is an active area of research.
The BUB1B protein interaction network based on our text and data mining results is shown in Figure 2. Five of the seven core checkpoint proteins MAD1L1, MAD2L1, BUB1, BUB3 and MPS1 are linked directly or indirectly to BUB1B via interactions we identified by text mining.
In the case of biomedical curation, it is essential that text-mining results are delivered to the curator in a transparent fashion, without the need of dealing with system technicalities, in order to prevent cognitive overload.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com