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1. Identification of essential in vivo enzymes of Mtb involved intensive literature mining and manual curation, to extract all the genes essential for Mtb growth in vivo across species [27 31].
Reasons acquired with these two approaches, data mining and manual inspection, were then compared.
Text mining and manual curation are subsequently used for fact extraction.
Both text mining and manual annotation require some kind of semantic standard.
Data mining and manual curation of the Daphnia pulex genome identified 75 functional CYP genes, and three CYP pseudogenes.
We combined a literature-based structural information mining and manual structural visualization approach in an iterative fashion to identify and map features of 3D domain swapping to structures.
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Although our current method is unable to validate FFPs, our use of associative text-mining and manual evaluation allows us to support 32 (of 185) associations as likely TPs.
VarDi is a database of disease-associated variants built through a combination of Hadoop-based text mining tools and manual curation [ 33].
A detailed discussion follows concerning comparison between results from data mining and the manual inspection of cases.
However, the majority of these models are still created de novo, based on literature mining and the manual processing of pathway data.
Briefly, we extracted CHD-related genes with text-mining technique and manual confirmation and collected PPI, Pathway and drugs information from public resources.
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