Sentence examples for minimum window quality from inspiring English sources

The raw Fastq files were cleaned using Sickle 1.33 (Joshi and Fass 2011) with a minimum window quality score of 20.

Reads were further trimmed to remove low quality bases, using Sickle version 1.200 [ 30], with a minimum window quality score of 20.

The raw fastq files were trimmed for the presence of the Illumina adaptor sequence using Cutadapt and then subjected to window-based quality trimming using Sickle with a minimum window quality score of 20.

‡Discarded reads were removed using Trimmomatic based on a sliding window quality cut off of (4:15) and a minimum length of 36 nt after adapter removal.

Table 6 shows the minimum window sizes for 200-character packets.

Fig. 3 Minimum window vs transmission probability.

Take the cost of new replacement residential window: maybe $900 plus $150 to install, depending upon window quality, etc.

Using the 454 base quality scores, which range from 0 40 (0 being an ambiguous base), sequences were trimmed using a sliding-window technique, such that the minimum average quality score over a window of 50 bases never dropped below 30.

Parameters for SNP detection included: a minimum read coverage at the potential SNP of 6, window length of 9, minimum average quality score of 15 and minimum central quality (i.e. quality of the SNP base) of 20.

Accordingly, the data were filtered using the following criteria: minimum average quality score: 35 for a windows of 50, number of differences to the primer sequence = 0, maximum number of differences to the barcode sequence = 0, number of ambiguous base calls = 0, maximium homopolymer length = 8.

First, reads were quality filtered on read length (200 450 bp) allowing for homopolymers (maximum 8), a maximum of 2 differences with the primer sequence and minimum average quality score of 20 over a window of 50 base pairs.