Sentence examples for minimum similarity threshold from inspiring English sources

The minimum similarity threshold can be defined through the ELN interfaces (Fig. 11).

We can see the impact of varying the minimum similarity threshold on these structural measures.

EST assembling was executed using the CAP3 program, with a minimum similarity threshold of 90% and a minimum overlap of 40 bases.

In addition, a minimum similarity threshold sets the limit below which sequences will be rejected even if they are the most similar sequence in the database.

Beyond a minimum similarity threshold of ~0.4, there appears to be an almost linear relationship between the threshold used and the measured accuracy.

The longest ORF of each transcript was extracted, and a final round of global clustering was performed on the protein sequences using usearch with a minimum similarity threshold of 95% and strong gap penalties to retain most splice variants (i.e. using the options -id 0.95 -iddef 2 -gapopen 20).

Minimum sequence similarity threshold was specified in terms of percent identity (-S parameter) and varied between 10 and 80 with step size 10.

To overcome this limitation, to some extent, we also used a 99% minimum genetic similarity threshold to estimate maximum V1R repertoire size.

We ran experiments for varying the minimum hybrid similarity thresholds, β∈[ 0.0,1], that control the size of the hybrid similarity graph, | E S |, by retaining only highly similar edges.

For spectral matching, a mass threshold and a minimum similarity match were defined.

Clustering parameters used were fragment similarity threshold 90% and minimum length coverage 25%.