Sentence examples for minimum sequencing coverage from inspiring English sources

Such information is invaluable because it allows us to determine the minimum sequencing coverage required before even beginning an experiment.

Among the tumor samples, we obtained a minimum sequencing coverage of 100 × for 85.7% of the exonic-targeted regions.

A certain minimum sequencing coverage is necessary for methylome analysis and several recent studies have demonstrated the advantages of the use of SMRT sequencing technology [ 44– 44].

All missense, nonsense, and indel mutations were included in our analysis if present in at least 5% of reads with a minimum sequencing coverage of 10.

Similarly, for the matching control samples, a minimum sequencing coverage of 50 × was obtained for 87% of the exonic-targeted regions.

To be considered for genotyping design, a SNP had to have a minimum sequencing coverage of 4x in at least three lines, with at least 50 bp of flanking genomic sequence surrounding the target SNP.

Simulation studies showed that >95% of the homoplasmic variants were detected at a minimum sequence coverage of 20× while heteroplasmic variants required >200× coverage.

Hence, the final assemblies were based on a minimum sequence coverage of 3×.

Final assemblies from the FLX and GLS platforms were based on minimum sequence coverage of 59 ×.

Alignments with a minimum score identity of 90% and a minimum sequence coverage of 80% were filtered out.

All identified full-length LTR retrotransposons were clustered into families or group using the CD-HIT software [ 73] with a minimum of 70%% of nucleotide identity and a minimum sequence coverage of 70%% between related elements.