Sentence examples for minimum sequence separation from inspiring English sources

Interactions between adjacent residues can be excluded by specifying a minimum sequence separation parameter.

For every such residue, we initially calculated the minimum sequence separation from the closest amino acid annotated as a positive instance.

(D.5) is the minimum sequence among sequences in and having the first symbol one at position.

Past a minimum primary distance of 6, however, the differences between the coevolving sites and all sites become constant suggesting that the tendency towards coevolution is indifferent to the degree of primary sequence separation beyond those separations strongly correlated to interactions within a secondary structure.

The options employed for SeqMan II assembly were match size = 12 bases, minimum match % = 80, minimum sequence length = 100, maximum added gaps per kb in contig = 70, maximum added gaps per kb in sequence = 70, maximum register shift difference (maximum base pair separation) between matches = 70, gap penalty = 0, and gap length penalty = 0.7.

In addition the same sequence separation features are included.

We defined a number of criteria to identify orthologous sequences including minimum alignment length (200 bp), minimum sequence identity (90%), and minimum alignment proportion (> 80% of shorter sequence).

Briefly, the large background for short sequence separations (the black 'diagonals' in presented maps) prevented use of MOHCA-seq constraints for short sequence separations.

Minimum angular separation between the orientation of bars within the same sequence was 10°; the orientation was chosen randomly otherwise.

All others are forbidden owing to the lack of minimum interatomic separation.

At midnight last night, the minimum vertical separation of aircraft in upper airspace was halved from 2,000 to 1,000 feet.