Sentence examples for minimum scoring threshold from inspiring English sources

Deciding upon an appropriate minimum scoring threshold for PWM-based analysis is an ongoing challenge, as each TF has unique characteristics.

EMBOSS einverted tool was used with a minimum score threshold of 20%.

The query is classified as a chimera if: (2) Here, h is the minimum score threshold (0.28 by default).

The following parameters are used for analysis: gap penalty: 12, minimum score threshold: 10, match score: 3, mismatch score: −4, and maximum extent of repeats: 500 bp.

UCHIME reports a score for each sequence, allowing the user to trade sensitivity for specificity by adjusting the minimum score threshold used to discriminate chimeras from biological sequences.

URRWXCal2 genome (National Center for Biotechnology Information [NCBI] taxonomy ID 315456) using the long-read option of the Burrows–Wheeler Aligner (BWA) v0.5.9 and a minimum score threshold of 200.

Terms are binned by size for the FDR computation, and we set a minimum score threshold value t ≥ 0.1 for large terms and higher threshold values for small terms so as to maintain an FDR <5% within each size group.

Based on the calculated scores and further refinement using the augmented degree of novelty compared to existing annotations and a minimum score threshold, novel GO terms are assigned to the genes in the target species.

We detected potential homologs sequences with MapMi (Guerra-Assunção and Enright 2010), setting the minimum score threshold to 20 and up to three mismatches (see Results for the list of genomes scanned).

For each profile, we ordered the scores of the hits from the shuffled sequence to establish a threshold above which only 5% of those hits fell, to be used as the minimum score threshold for hits from the corresponding true (not shuffled) target region.

To make the cut, companies had to meet at least two of the tracked criteria, and meet minimum score thresholds.