Sentence examples for minimum recombination threshold from inspiring English sources

Due to segregation distortion for some SSR loci, initially a framework genetic map was prepared with normally segregating markers at logarithm of odds (LOD) of 5 with a minimum recombination threshold of 37.5 using MAPMAKER/EXP 3.0 [ 52].

Recombination fractions were converted to cM using the Kosambi mapping function, with the following JoinMap settings: minimum LOD score = 1.0, recombination threshold = 0.4, ripple value = 0 1 and jump threshold = 0 5.

Marker order was determined by a regression mapping algorithm on the basis of a minimum LOD score of 1.0 and a recombination threshold of 0.4 in each LG.

Marker order was subsequently determined by a regression mapping algorithm on the basis of a minimum LOD score of 1.0 and a recombination threshold of 0.4 in each LG.

Within linkage groups, the optimal marker order was determined using JoinMap® 4 [ 136] default values of a minimum LOD threshold of 2.0, a maximum recombination threshold of 0.35, a maximum χ goodness-of-fit jump threshold of 5.0 for removal of markers and a ripple value of 1.0.

Linkage groups were constructed and ordered with a linkage LOD of at least 6.0, a minimum recombination fraction of 0.35, and a jump threshold of 5. SNPs exhibiting "suspect linkage" to several loci within their assigned group (as determined by JoinMap), poorly fitting markers within an ordered group, and markers that greatly inflated the linkage group size were dropped from the final mapping.

A linkage map was constructed with a recombination threshold of 0.45, and the minimum number of markers per group was set to two.

Marker grouping and linked loci ordering were performed using a minimum LOD threshold value of 6.0 and a minimum recombination fraction of 0.35.

The map was constructed with an LOD score threshold of 3.0 and the mapping parameters were set with a recombination threshold of 0.4, a jump threshold of 5.0 and a minimum LOD score threshold of 1.0.

Beagle computes minimum recombination histories with an exhaustive approach.

Define R j as the minimum recombination count before locus j.