Sentence examples for minimum match setting from inspiring English sources

They were then searched against the most recent version of the porcine genome (Sscrofa10 released in April , 2011 as described in the methods using the search parameters for LaserGene 9.0® with a minimum match setting of 98% (Additional file 3).

All components from AMDIS analysis were searched in the NIST database (with one reported hit per compound and with a minimum match factor set to 60%, meaning that a threshold of 60% similarity was used for the spectral matching.

Then, we performed an NGen assembly where the Chrysemys genome was used as template and the Pelodiscus exons and flank sequences as reads (default NGen parameters, "Other" as sequencing technology, and Minimum Match Percentage set to 80).

Reads that aligned with high confidence to draft genomes of these three micro-organisms were first identified using the MUMmer algorithm (Delcher et al., 2003) (with the minimum length of a match set to 70% of the full read length).

The quality of the alignments was filtered according to the following criteria: 1) the minimum match length was set to 29 nucleotides with no gap larger than 1 nucleotide 2) alignments had to start with the DpnII site as the first nucleotides.

The high-stringency setting corresponded to setting the minimum match percentage to 90%.

The extent of redundancy for each library was ascertained using the Phrap software (Phil Green, http://www.phrap.org), which was also used to compile the unisequence set (minimum match of 50, minimum score of 100).

Sequenced contigs were assembled using "Sequencher" version 4.2 (Gene Codes Corporation, Ann Arbor USA) in order to minimize the redundancy of the sequences or to get longer continuous partial overlapped sequences with the parameters set at minimum match 90%, overlap 30 base pairs, and default data algorithm.

Default parameters were used for template assemblies (with "other" as sequencing technology) except for the "Minimum Match Percentage" parameter that was set to 80.

The high-stringency setting corresponded to a minimum match percentage of 93%, and we retained contigs comprising ≥200 reads.

Although the Sphere Project outlines minimum standards, there is no "matching" set of indicators for each domain.