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The PE molecules were placed on randomly selected lattice points and then expanded by self-avoiding random walks until the molecules reached a minimum length threshold.
The minimum length threshold that was used was 22bp, unless otherwise stated.
To define a minimum length threshold for regions detected as present, or similarly expressed, the length distribution of the expressed regions (≤50 nts) with a signal above the background level were plotted in a histogram (Figure 7).
The minimum length threshold l and the size of forward lookup w f were empirically set.
Thus, we could obtain longer regions using a higher minimum length threshold.
Since the leader sequences contain an RBS, we set the minimum length threshold to 14 nt.
Similar(39)
In CSMinfinder, we used two types of minimum length thresholds, 4 kbp and 8 kbp, to evaluate the effect of this constraint.
The mean repeat count in simple and compound microsatellites was highest for mononucleotide motifs and decreased with increasing motif length, as expected from the minimum length thresholds necessary to complete a locus of at least 15 nucleotides.
A 250 bp minimum transcript length threshold was enforced.
Analyses geared towards detecting more recent autozygosity should increase the minimum SNP length threshold.
We ran Refined IBD with a minimum genetic length threshold of 0.5 cM.
More suggestions(15)
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