Sentence examples for minimum length fraction from inspiring English sources

The following criteria were used to filter the unique sequence reads: minimum length fraction of 0.9; minimum similarity fraction of 0.8; maximum number of two mismatches.

Quantitative analysis was performed using CLCbio (CLC Genomics Workbench 4.8, parameter settings: minimum length fraction, 0.5; minimum similarity fraction, 0.95; maximum number of hits for a read, 10).

Also the minimum length fraction of the long reads was decreased to 0.27 to help form contigs across low coverage regions.

The RNA-seq analysis tool included in the CLC Genomic Workbench was used for this purpose (minimum length fraction and minimum similarity fraction were set at 0.75 and 0.95, respectively).

The "RNA-Seq analysis" option was used to map reads to each database at the following settings: minimum length fraction 0.9, minimum similarity fraction 0.8, and maximum number of hits for a read 30.

Salinas were mapped back to the query sequences using the CLC Genomics Workbench (http://www.clcbio.com), using parameters: mismatch cost = 2, insertion and deletion cost = 3, minimum length fraction = 0.9 and similarity 1.

The maximum number of mismatches allowed was two; the minimum length and similarity fraction was set at 0.8; and the maximum number of hits per read was 10.

De novo genome assembly was done by de novo assembly tool in CLC Genomics Workbench with mismatch cost, insertion cost, deletion cost, similarity fraction, length fraction, and minimum contig length of 2, 3, 3,0.9, 0.9, and 1000, respectively (all other parameters were set as default or auto-detect mode).

The sequencing reads from each tissue were mapped back to the reference unigenes based upon a minimum similarity of 0.9 and length fraction of 0.5 [ 66].

Only paired-end samples were used for de novo assembly using CLC Genomics Workbench (mismatch cost = 1, insertion/deletion cost = 2, length fraction = 0.5, minimum contig length = 200).

We carried out a genome assembly for the S30 sample using CLC Assembly with minimum contig lengths = 2000, similarity = 0.85, length fraction = 0.5, insert cost = 3, deletion cost = 3, and mismatch cost = 2.