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If the confidence is not less than the minimum confidence threshold, we have a significant sequential rule.
Generating the desired rules from the frequent sequences if they also satisfy the minimum confidence threshold (minConf).
Let us denote (s_0) as the minimum support threshold and (c_{0}) as minimum confidence threshold, where (s_{0}, c_{0} in (0; 1]).
The mining process is usually decomposed into two phases: (1) Mining all frequent sequences that have supports above the minimum support threshold (minSup) (2) Generating the desired rules from the frequent sequences if they also satisfy the minimum confidence threshold (minConf).
Matched peptides were further filtered at the precursor ion mass accuracy level using a 20 ppm cut-off, while protein hits were compiled and filtered using the StatQuest program with a minimum confidence threshold of 99%.
Similar(55)
The proposed DE performs a database-independent approach which does not rely upon the minimum support and the minimum confidence thresholds which are hard to determine for each database.
We used a minimum confidence score threshold of 30 as a filtering parameter for the GATK UnifiedGenotyper tool (McKenna et al. 2010).
Let us choose the maximum support threshold (s_1= 0.5) and the minimum and maximum confidence thresholds ({c}_0 = 0.4) and ({c}_1) = 0.9, respectively.
The minimum and maximum confidence thresholds are denoted by (c_{0}) and (c_{1}), respectively, where (0<c_0 le c_1 le 1).
SNP and InDel calling for each sample were performed independently using the UnifiedGenotyper package in GATK with a minimum phred-scaled confidence threshold of 50, and a minimum phred-scaled confidence threshold for emitting variants at 10.
A ruleitem is strong if and only if it satisfies a minimum support θ (named minsup) threshold and minimum confidence δ (named minconf) threshold.
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