Sentence examples for minimum block length from inspiring English sources

Indels and nonalignable regions were excluded from the alignments using Gblocks62 version 0.91b, with minimum block length of 2 bp.

This despite reducing the minimum block length as low as 2 in SynMap.

Next, anchors comprising short LCBs that span less than the minimum block length, L, are removed from the graph.

The consequent concatenated alignment was filtered for low-quality sites using Gblocks (v.0.91b) (maximum contiguous nonconserved positions 8, minimum block length 10) (Castresana 2000).

All chromosomes from the 36 genomes were aligned using the parameters "-distance = 1000" and "–minlength = 30", which specify the maximum genomic distance between adjacent anchors and the minimum block length, respectively.

G-Blocks settings were always set to the default parameters except for maximum number of contiguous non-conserved positions (10), minimum block length (4), allowed gap positions (with half), and use of similarity matrices (yes).

The block attributes are: number of multi- mapped reads, entropy of read lengths, entropy of read expressions, minimum read length and block length.

The proposed estimation model uses several factors, such as the distribution of NC blocks, angle between the blocks, federates, acceleration and deceleration constants, classifying tool feed rate patterns into four types based on the acceleration and deceleration profile, NC block length, and minimum feed rate.

Also, the minimum did not depend on the block length if km>400 (Fig. 2B).

For the 12S rRNA and 16S rRNA alignments, ambiguous positions were eliminated using the Gblocks program (version 0.91b, [ 146]) with the following options: a minimum of half the number of sequences for a conserved position and for a flank position, a maximum of 8 contiguous non-conserved positions, a minimum of 2 sites for the block length after gap cleaning, and all gap positions can be selected.

The code C, denoted as ( i N,K,dmin), has block length N, dimension K, and the minimum Hamming distance between any two codewords dmin.