Sentence examples for minimization the system from inspiring English sources
After energy minimization, the system is gradually heated to 300 K in (protein and ligand) heavy-atom restrained NVT simulations of 10 ps simulations (at 100, 200 and 300 K, with restraining force constants of 10,000, 5000 and (50 hbox { kJ mol}^{-1} hbox { nm}^{-2}), respectively).
After appropriate energy minimization, the system was equilibrated in the canonical ensemble at 310 K for 500 ps, and then in the isobaric-isothermal ensemble for 1 ns, using harmonic restraints of 0.5 kcappliedÅ2 applied to alpha carbon atoms.
After an initial energy minimization, the system was simulated in the isothermal-isobaric ensemble.
After energy minimization, the system underwent a 5-ns equilibration (including heating up to 300 K) with position restraints applied to all protein atoms.
Following minimization, the systems were gradually heated to 310 K and equilibrated for 50 ps.
After initial energy minimization, the systems were subjected to 30 100 ps of constant number, volume and temperature (NVT) equilibration, during which the system was heated to 300K.
After initial energy minimization, the systems were subjected to 100 ps of constant number, volume and temperature (NVT) equilibration, during which the system was heated to 300 K.
After initial minimizations, the system was gradually heated to 325K, equilibrated for 100 ps and production runs were carried out for 100ns on the wild type sequences of p53/p63/p73 and several mutants; in addition, the effects of phosphorylation were also examined in p53/p73 (this stretch of p63 does not contain any S/T residues).
In the previous section, the optimization criterion used for adjusting the control parameters was the minimization of the system misalignment.
We minimize the weighted norms of the quantization error in the output of a Δ Σ modulator, which corresponds to the minimization of the system norm.
The second one is developed in the context of a state-variable model and follows an optimization criterion based on the minimization of the system misalignment.
