Sentence examples for minimal word size from inspiring English sources

Exact(1)

Similar to the minimal word size as e.g. used in BLAST (Altschul et al., 1997), it is reasonable to consider a minimal size γ for EPMs.

Similar(57)

The obtained sequences with 5 kb of flanking region were searched by using FastPCR v6.1 (26) to look for TIRs with initial searching word size of 12, filter minimal string length of 17, minimal alignment string length of 18, gap size between strings of 10, local similarity of 75 and alignment output length of 100.

A key parameter in assembly of short reads is the k-mer word size, which represents the minimal exact match that is needed to combine two reads into the same contig.

In comparison, word size in xMAN, which is the minimal length of an identical match, is always equal to the length of the query oligonucleotide and has no effect on the searching time.

Compared to adder graphs with minimal adder depth, the latency could be reduced by approximately 33% on average for an input word size of 8 bits.

Word size corresponds to relative usage frequency.

Dutch listeners categorized minimal word pairs such as /tɑk/ /taːk/ ("branch"–"task") embedded in a context sentence.

These vary in instruction of word size, stack size, number of instructions, and interrupt vectors.

Assembly of J. osense plastome was performed using CLC Genomics Workbench v. 5.5 with following parameters: word size = 22, bubble size = 50, mismatch cost = 2, insertion cost = 3, deletion cost = 3, minimal contig length = 1,000 bp.

For each word size k, we define the set of all words that exist in x but do not exist in y by (1) R k (x, y ¯ ) = W k (x ) ∩ W k (y ) ¯ and the subset of words that are minimal, in the sense presented in Pinho et al.

We used German minimal word onset pairs like MANdel (Engl. almond) and manDAT (Engl. mandate).

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