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The minimal cluster size was determined with the cluster-level estimation plug-in in BrainVoyager, which implements a Monte Carlo simulation for multiple comparisons correction of p < 0.05 (1000 simulation47. For detailed analyses of the resulting clusters beta values of each predictor per participant were exported to SPSS version 22 (IBM Corporation, New York).
All regression analyses were carried out with an exploratory uncorrected statistical threshold set at p<0.001 with a minimal cluster size of 10 voxels.
P values were set at 0.05 FDR False Discovery Ratee) corrected for multiple comparisons in a whole brain analysis, which yielded a minimal cluster size of 5 voxels.
To evaluate the influence of minimal cluster size (TS), performance metrics of the MIC were evaluated at different values of TS (i.e., 8, 15, 25, and 40).
We chose relatively conservative criteria by correcting for serial correlations, performing corrections for multiple comparisons, and by applying a minimal cluster size of 25 mm3.
An initial simple structure CFA model with correlated latent factors was specified and evaluated on the basis of ICLUST item clusters meeting the following criteria: Satisfactory indexes for internal consistency (Cronbach's α>0.8) and homogeneity (Revelle's β>0.7), a minimal cluster size of three items, good interpretability, and conceptual importance.
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Minimum cluster size = 25 voxels.
The original fraction of the 26 981 BF clusters among all clusters is a mere 0.5%, while the fraction following the minimal thresholds of cluster size >10 and LT >0.5 is 3.5%.
The user hovers the mouse over a cluster to display essential (minimal) information such as the cluster size.
Out of these, 107 were suspected for superinfection and in 94 cases the sequences of the patient belonged to a closely related transmission cluster (size of minimal subtree ≤ 50, see Methods).
The minimal number of contiguous voxels was based on the expected cluster size.
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