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It showed that all geographic regions represented in the core set were also present in the mini core set, although in slightly different proportions.
The core collection was genotyped with 20 simple sequence repeat markers and a mini core set of 289 accessions was selected, which depicted the allele and genotype diversity of the core collection.
Summary statistics were applied to evaluate the representativeness of the core and mini core collections: Means, Variance, Equality (χ test), Karl Pearson's correlations and Shannon's diversity index were calculated for the whole collection, the core and the mini core set in SAS SAS Institute Inc.., Cary, NC, USA).
Neither alternative mini core set had better summary statistics scores for phenotypic parameters than the mini core constructed by Core Hunter software.
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The passport and evaluation data of the accessions of the core and mini core sets are available in the AVRDC Vegetable Genetic Resources Information System at http://203.64.245.173/.
Both number of alleles and number of genotypes was decreased in the alternative mini core sets compared to the Core Hunter mini core.
The differences between the mean values for the phenotypic descriptors of the mini core and core set increased compared to the difference between the core and whole collection, but remained under 1% for four of the eight descriptors, and reached a maximum of 9% for V130 (plant height at maturity).
The significance test of two population correlation coefficients between the core collection and the Core Hunter mini core was significant at p = 0.05 for one descriptor (V700), while it was significant for four descriptors for the alternative mini cores.
Get past the outer layers of the new show -- the somewhat lighter tone, the familiar mordant humor, the deadpan portraits of bland condos and squat mini-malls -- and its core set of narrative concerns start to look mighty familiar.
Using a relatively large set of molecular data-points, the Chinese mini core collection was divided into two major sub-groups basically, landraces and modern varieties.
Entries of the mini core are labeled with MC in the Mini core column.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com