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The whole experiment excluding short read alignment requires ∼10 min of compute time.
For that data set, the exact number of optimal sorting paths is computed to be 24,631,200, using about 45 min of compute time.
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The protocol's execution time depends on the computing resources, but it typically takes under 45 min of computer time.
Our test results show that the GPU code can calculate systems with about ten thousand atoms fully self-consistently in the order of 10 min using thousands of computing nodes.
We divided the gradient time in windows of 10 min, and computed the median peak width of the features eluting in each such window.
Clustering the full dataset (833 013 unique sequences) to 97% identity threshold required a total of 2 h and 42 min on a compute cluster of 24 nodes with 8 cores each (192 total cores).
They have a handful of compute styles.
This patient recovered consciousness within 5 min. Computed tomography of the brain revealed no focal cerebral or cerebellar abnormality.
The stimulated superoxide anion (O2–) and total oxidative products were captured every 10 sec and computed for 7 min after 1 min of baseline detection.
The amount of glucose metabolized during the last 60 min of the clamp (M value, reference insulin sensitivity) was computed with standard formulae (13).
The average background signal over the course of at least 5 min of fluorescence monitoring was subtracted from the sample readings before F/Fo was computed.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com