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We found that the steady state had been already reached after two millions generations.
After analyzing each run separately, the program Tracer v1.5 (distributed with BEAST) was used and the first 30 millions generations were discarded as burn-in samples.
We estimated posterior probability distributions by allowing six incrementally heated Markov chains to proceed for two millions generations, with samples taken every 1000 generations.
The Bayesian Monte Carlo Markov chain reconstruction was run for 50 millions generations and trees were sampled every 1000 steps, with the first 10 thousand trees discarded.
Using CIPRES Science Gateway V. 3.3 [ 49], a public resource for inference of large phylogenetic trees, the same XML file was run for seven independent simultaneous runs of 300 millions generations sampled once every 30,000 trees.
Similar(55)
Samples were taken every 100th generations.
(p-value < 0.05 for 3rd, 4th and 5th generations).
"I'm a 10th-generation Drakeley, a 10th-generation Woodbarian.
"Our children are 14th generation".
She's a 12th generation Baltimorean.
He is ranked 90th in the clan's 27th generation.
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