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Some of these hits might represent false positives.
On the other hand, short stretches appearing to be expressed in both conditions might be a result of probe artefacts, indicating that they might represent false positives.
However, if males have a higher dispersal ability than females, a maternally-inherited mitochondrial marker might represent false clustering, and such a sex-biased dispersal has been reported in several animals [e.g. 22] [24].
First, associations between genotype and morphology might represent false positive results due to multiple testing or undetected population stratification.
This might represent false negative QFT, but there was no association between known TB risk factors and TST ≥ 15 mm.
Since very small effects of BCG on TST reactions are expected after 10 years for people vaccinated in infancy [ 21], this might represent false negative QFT-TB tests [ 6].
Similar(52)
To exclude species-specific sequences that might represent false-positive gene prediction, for each of the three species above, we prepared a set of sequences for which homologs are present in the other two species.
A caveat to this analysis is that genomic regions detected as potentially evolving under positive selection using outlier approach might also represent false positives [ 35, 36].
However, it is not known whether these might actually represent false-positives as, according to our analyses, OP swabs showed poorer specificity (90.2%) compared to NP swabs (96.8%) (Additional file 1).
This gene does not appear to contain any signatures of the currently known HMMs for GTs and might represent a false negative of our analysis or an erroneous annotation in the current release of the L. rhamnosus GG genome NC_013198.1.
TP represents True positive, TN represents True negative, FP represents false positive and FN represent false negative.
More suggestions(15)
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