Sentence examples for midpoint rooting from inspiring English sources

Each tree was rooted using the midpoint rooting method.

If midpoint rooting is applied, the nine Ae. aegypti MJ1 sequences form a broader and well supported clade (credibility score 1.00) with two An.

The NJ analysis was performed using MEGA version 4 (http://www.megasoftware.net/) [68] with 500 replicates, pairwise deletion, midpoint rooting, and the Tamura-Nei method.

If we accept midpoint rooting of the unrooted tree shown in Figure 5, Ae. aegypti MJ1 form a well supported clade with some of the MJ1 sequences from the two basal species mentioned above.

For these trees, in each case a few deep branches were identified that may contain the root, with ANCESCON's midpoint rooting function invariably agreeing with one of these selections.

The clade composed of these clusters contains 24 sequences, all of which belong to specimens with thorny-spiny spores; after midpoint rooting, this clade appears as the sister group of all other examined Hymenogaster spp. (Fig. 1).

The inferred trees were then midpoint rooted prior to analysis.

The resulting tree was midpoint rooted using MEGA version 3.1 [57].

In cases where outgroups were unavailable (for vlm gene nucleotide data), trees were midpoint rooted.

All trees were midpoint rooted since an appropriate outgroup is not available for vlm data.

Several clades were consistently recovered and the midpoint root was generally placed in the same position across all MSAs (Figure 1a, Figure 2).