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Here we have investigated the genetic diversity (by means of 11 microsatellites) of two Norway spruce seed orchard populations with different number of parents (60 and 25) and compared this with seed crops collected in the semi natural forest and natural unmanaged populations.
Figure 4 depicts the visualizations of pair-wise genome comparison of distribution of microsatellites of two genomes ' Mycobacterium Tuberculosis 7199-99 complete genome' and ' Mycobacterium bovis str.
The graphs will be useful for comparing two closely related genomes where one can compare the motif size-wise distribution of motif size-wise of two genomes sidistributionpart frof their distribution in coding and non-coding regions and their coding densities.
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Jakupciak and Wells [ 22] showed that 'illegitimate' recombination involving an inversion between two homologous microsatellites may create compound microsatellites consisting of two microsatellites with self complementary motifs such as [CTG]13 [CTG]13.
Of the 141,626 contigs derived from the 454 white shark data, 6,555 (4.6%) contained one or more dinucleotide, trinucleotide, or tetranucleotide microsatellites of five perfect repeats or more.
Contigs were searched for di, tri, and tetra microsatellites of five repeats or more using Phobos v3.3.12 as implemented in Geneious v5.5.3 [ 77].
We find 6,843 transcripts containing one or more di-, tri- or tetranucleotide microsatellites of five perfect repeats or more in our catshark data, with 482 of these only in pancreas, 3,083 only in brain and 473 only in liver (Table 4).
We observed that the majority of compound microsatellites consist of two cSSRs.
Each microsatellite consists of two tracts, for example a [AC] n microsatellite consists of a poly-AC and a poly-TG tract on the complementary strand.
The most abundant tetra- and penta-nucleotide motifs were (AAAT n and (AAACA)n, which comprised about 42.03% and 31.76% of the total number of microsatellites of these two repeat category, respectively.
Although the microsatellite patterns of one sled-pulling mutt might include his pointer grandpa and Siberian forebears, most of the microsatellites represented the unique Alaskan sled dog pattern.
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