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Microsatellites are distributed non-randomly across plant genomes and are associated with non-repetitive DNA (Zhang et al., 2006).
Microsatellites are distributed throughout the genomes and are found in both coding and non-coding regions (3).
In addition, the 19 microsatellites are distributed across five of the six chromosomes (Michel et al. 2010) of the Rhagoletis genome (the small sixth dot chromosome is highly heterochromatic and currently does not contain a marker).
However, although microsatellites are distributed ubiquitously throughout the Coffea genome, only a few of them are suitable for designing informative markers with properties such as strong and specific amplified fragment after PCR and easy scoring of allele sizes, high heterozygosity and/or known position along a linkage map.
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More than 40% of different length categories of microsatellites were distributed in intergenic regions.
The microsatellites were distributed in 9 autosomal linkage groups (LG1 - LG9) and one Z-chromosome linkage group (LGZ) covering in total 999 cM in females and 822.9 cM in males.
In the case of trimeric repeats, it is worth to note that this kind of microsatellite was distributed homogenously along ESTs.
The data indicates that the microsatellite markers analyzed are distributed throughout the genome of C. melo.
The results indicated that microsatellites developed in P. khinjuk are distributed in the genome of indigenous pistachio species including P. vera genotypes and therefore they will be useful in characterization of Iranian pistachio genotypes.
It contained 220 markers, including 8 expressed sequence tag-simple sequence repeats (EST-SSRs), 25 amplified fragment length polymorphism (AFLPs) and 187 Random Selective Amplification of Microsatellite Polymorphic Loci (RSAMPLs), that are distributed on 30 linkage groups, which is more than 2 folds the number of chromosomes of the haploid sesame genome.
Microsatellites are short tandemly repeated DNA sequence motifs which are distributed plentifully in Leishmania species.
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