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Furthermore, the protocol can be used to simultaneously collect both, chemical and microbial water samples on CAFOs and similar IFREs.
Microbial water samples were collected in October 2006, May 2007, and September 2007 from four monitoring wells on two dairies; and in January, April, and September 2008, and in March 2009, from 13 to 17 monitoring wells (depending on accessibility on the sampling date) on the same two dairies.
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Moreover, as a post-sequencing analysis we used a phylogenetic entropy approach implemented in PhyloH16 to provide a comprehensive view of the microbial diversity in water samples.
Microbial communities in water samples were significantly different between cRAS and mRAS already on 5 days post-hatching (dph) and throughout the experiment.
The metagenomic data generated from the microbial fraction of water samples was examined for the presence of viral sequences by comparison to the NCBI non-redundant (nr) protein database.
The total microbial load of water samples collected from thirteen DCUs was determined using conventional microbiological methods.
In order to study the active microbial community in fracture water samples, the bacterial and archaeal 16S rRNA pools were also characterized and used as proxy for active (living) microbial cells.
The types of samples that can be collected include high-temperature fluids, diffuse flow (low-temperature, shimmering water) water samples, microbial mats, rock and sulfide mineral samples, epibionts and symbionts associated with animals.
The class 1 integrons and associated gene cassettes present in the microbial communities in selected water samples were also examined using a culture-independent approach.
At one point she had 8,000 elementary school students gathering water samples for microbial studies.
This study focuses on chemical and microbial analyses of 50 Zamzam water samples, Saudi Arabia.
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