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Pylro, V. S. et al. Data analysis for 16S microbial profiling from different benchtop sequencing platforms.
Rumen fluid and digesta were collected on d 22 and 28 for volatile fatty acid analysis and microbial profiling.
Microbial profiling documented a significant alteration in species composition of microbial communities after repeated load-shock applications specific to enrichment of Firmicutes which are favourable for H2 production.
Microbial profiling of metagenome communities have been studied extensively using MG-RAST and other related metagenome annotation databases.
DNA fingerprinting methods such as polymerase chain reaction-denaturation gradient gel electrophoresis (PCR-DGGE) facilitate the microbial profiling of complex ecosystems including infected chronic wounds.
In the present study, we report the enumeration of rumen bacterial species using qPCR and its comparison with the MG-RAST based microbial profiling of rumen metagenome by shotgun and amplicon sequencing.
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Cross-geography comparison of microbial profiles using Principle Component Analyses (PCA).
Within two weeks, Khoruts's research shows, the microbial profiles of donor and recipient colons are in sync.
This method is fast: it usually takes fewer than 24 hours to prepare a microbial profile.
Microbial profiles could also be used in diagnosing, and perhaps even treating, specific diseases.
Only after researchers have generated microbial profiles of many different people will they be able to gauge the normal variability of microbial profiles in people of different ages and origins.
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