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Microbial profiles were assessed by terminal restriction fragment length polymorphism (t-RFLP).
Rumen pH, concentration of total and individual volatile fatty acids, microbial protein outflow, and microbial profiles were not affected by treatment.
Other microbial profiles were not clearly associated with in-hospital death (Table 6).
Consistent with previous microbiome studies, the microbial profiles were quite diverse within the CF cohort [ 9].
At the Forsyth Institute, microbial profiles were generated from image files of scanned HOMIM microarrays (http://bioinformatics.forsyth.org/homim/).org/homim/
DGGE data showed that the intestinal microbial profiles were considerably different among all metabolic phenotypes (see figure 2 in online supplement).
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Preliminary evidence also indicates that rumen microbial profiles are heritable and sustainable within an individual, and that rumen microbial community structure can revert to its original profile within a short period following substantial perturbation.
Lita Proctor, coordinator of the NIH-funded Human Microbiome Project (HMP), adds that the field is now mature enough to start having debates about the data, including whether the controversial claim that humans can be classified into three different "enterotypes" depending on their microbial profiles is valid.
Moreover the relation between the metabolites and the microbial profiles was analyzed with a PLS model with OSC, the metabolites were used as explicative variables.
No correlation to microbial profiles was found in alcohol users (P = 0.41) (Fig. 5B).
The aim of the present study was to evaluate whether specific microbial profiles are associated with ongoing infection needing relaparotomy and/or with in-hospital death.
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