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The description of soil microbial communities has been implicit, often treated as a 'black box'.
Traditionally, the analysis of soil microbial communities has relied on culturing techniques using a variety of culture media designed to maximize the recovery of diverse microbial populations.
Much of our understanding of the spatial organisation of microbial communities has been obtained at scales that are inappropriate for identifying how microbial functioning and spatial patterns are related.
Interestingly, the most immediate impact that many of the resulting strains have had on our understanding of marine microbial communities has not resulted from experiments aimed to interrogate cellular physiology, but rather from their sequenced genomes.
Limited knowledge of optimal microbial community composition for PPCP biotreatment, and of the microbial phylotypes that drive biotransformation within mixed microbial communities, has hindered the rational design and operation of effective and reliable biological PPCP treatment technologies.
Hence, the screening of effective microbes among the diverse marine and terrestrial microbial communities has been carried out worldwide for the last few decades.
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Intestinal microbial communities have profound effects on host physiology1.
In a few well-studied cases, microbial communities have been observed to coordinate their metabolic fluxes.
"Microbial communities have been used as biotechnology by human societies for millennia.
However, microbial communities have proven difficult to study due to a lack of suitable experimental and computational tools.
Microbes and microbial communities have evolved to exploit biomass as a nutrient source, and they have developed enzymatic systems that degrade lignocellulose and metabolize the resulting molecules.
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