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The same cDNA microarray was repeated in three individual mice.
The microarray was repeated twice in triplicate each.
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For each treatment, the microarray analysis was repeated 4 times.
The microarray experiment was repeated with color-swapping of Cy3 and Cy5.
Each microarray experiment was repeated as technical replicates for statistical robustness.
These findings were consistent when the microarray analysis was repeated with MSCs isolated from a different donor (data not shown).
To obtain RNA for the microarray experiments, each treatment was repeated twice on independent assays.
The microarray analysis for each bacterial strain was repeated for three times and the data were analyzed using a statistics software MAS-5.0 from Affymetrix.
To increase the amount of relevant information from the 8 h microarray data set, the GO analysis was repeated, but this time using an adjusted P-value < 0.5.
This testing on sampled microarrays and comparison to gold-standard lists was repeated.
Each probe was repeated three times in each microarray.
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