Sentence examples for microarray studies see from inspiring English sources

The DER value of a gene is its frequency of differential expression in multiple microarray studies (see Methods section).

On the other hand, Ig genes were absent in our myofiber-specific microarray studies (see Supplemental Table S1 at http://ajp.amjpathol.org ).org

In general there was little overlap between the hub genes identified from our network meta-analysis and the most-differentially expressed genes prioritized from the individual microarray studies (see Additional file 5: Table S4).

Since expression of calmodulin 3 was variable among different microarray studies (see additional file 1) we validated our result with real-time PCR and confirmed the observed underexpression of CALM3 in CRC.

To further validate these molecular subtypes, we used an external and independent dataset that included 97 from the van't Veer [ 10] and 12 tumours from the Sorlie's [ 4] microarray studies (see Additional File 1, Table S5, for the list of these tumours).

All these genes except ADORA1 were previously found by single gene studies (see Table 1) and later confirmed by microarray approaches.

In contrast, genes such as peptidylprolyl isomerase A (PPIA, aka cyclophilin A) (6.11), transferrin receptor (TFRC, p90, CD71) (4.70), and phosphoglycerate kinase 1 (PGK1) (5.04) identified in a microarray meta-analysis study (see above) [ 11], performed poorly in our study, as revealed by the relatively high permutation scores.

The 18 mechanism scores were computed from between 1110 and 1387 total unique genes, depending on the microarray platform used in each study (see Additional files 2 and 3), with significant overlaps between the gene sets for each mechanism (Fig.  3).

For sample selection, cRNA preparation, microarray hybridization and normalization methods in this study see elsewhere [ 3].

It is common to see microarray studies with only a single time point represented.

Thus laterality as a heritable index behaviorally assessed predicts human ability in a way that no molecularly identified gene has been shown to do [for the failure of microarray studies to predict dyslexia see Plomin and Davis, 2009].