Sentence examples for microarray studies related from inspiring English sources

To illustrate the statistical issues involved we discuss three microarray studies related to the microenvironment and tumor biology involving: (i) prostatic stroma cells in cancer and non-cancer tissues; (ii) breast stroma and epithelial cells in breast cancer patients and non-cancer patients; and (iii) serum associated with wound response and stroma in cancer patients.

For most microarray studies related to melanocytic tumorigenesis, cell lines or fresh tumour cells that were cultured for some passages were used to examine differential gene expression (Baldi et al, 2003a; Dooley et al, 2003; Rumpler et al, 2003; Hoek et al, 2004).

We employed custom DNA microarrays that contained probes covering 10 kb of genomic sequences flanking the transcription start site (TSS) of 5000 genes selected from our pervious microarray studies and related literatures.

For instance, a large collection of cancer related microarray studies has been organized at Oncomine Research [25], which has led to novel gene discoveries not robustly identified in the individual datasets [26], [27].

A wide survey of deposited drought related microarray studies, in various plant and crop species, was conducted.

Data integration techniques, so-called meta-analyses, aim to combine the data available and integrate information from multiple independent but related microarray studies to identify significant genes [reviewed by Feichtinger et al. (5)].

Both paa and lpfA were found to be significantly associated with atypical EPEC diarrhoeal isolates in a microarray study of pathogenesis related genes [48].

The higher abundance of photosynthesis-related genes, together with the large number of such genes that were found to be regulated during cold acclimation in the microarray study, may be related to the importance of an effective regulation of photosynthesis for the abiotic stress tolerance of plants to sustain growth and avoid oxidative damage (see [ 70] for a review).

In contrast to [ 30] we accept that S. lividans does in fact possess bldB and attribute its apparent absence in microarray studies to technical reasons relating to positioning of probe design and the pattern of sequence similarity between the S. coelicolor and S. lividans genes across their sequences (see Additional Files 10 & 11).

In a recent publication [ 26] a number of quality parameters related to microarray studies of post-mortem brains were considered on the basis of 90 brain samples.

Moreover, a recently published review of published microarray studies that focus on cancer related outcomes showed that the most common flaw in classification studies is a biased estimation of the accuracy (present in 12 of 28 studies published in 2004 [ 23]).