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This approach is made possible by the fact that some microarray platforms, like Affymetrix, measure transcript abundance using several sequences taken from the 3' end of the gene.
Such high-throughput technologies have several advantages compared to traditionally used microarray platforms like a low background signal, large dynamic range of expression level, and possibility of detecting novel transcripts.
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Gene expression profiles in the hippocampus of five wild-type and five transgenic δC-doublecortin-like kinase mice were evaluated with five microarray platforms: Applied Biosystems, Affymetrix, Agilent, Illumina, LGTC home-spotted arrays.
We have validated and characterized the two main previously defined clinically relevant subtypes, luminal A and basal-like, in early stage breast carcinomas, using three different DNA microarray platforms.
The density of oligonucleotide probes available on current microarray platforms is particularly well-suited for comparisons of organisms with smaller genomes like bacteria and yeast where an entire genome can be assayed on a single microarray with high resolution.
To simplify and speed up the anchoring process, it is also possible to use methods like multiplex tandem PCR with high resolution melt analysis [ 13], microarray platforms [ 18], or Illumina GoldenGate assay [ 19].
There are two major microarray platforms that have been widely used: cDNA microarrays and oligonucleotide microarrays.
Agilent 8x60K microarray platforms were used for these transcriptome analyses (Xuan et al. 2013).
Because microarray platforms use their own element IDs rather than common gene IDs, two search tools were developed to determine the relationship between microarray elements and rice genes.
The US Food and Drug Administration (FDA -led community-wide Microarray Quality Control (MAQC) study generates a large amount oFDA -ledrray data with implementation of ERCs across several commercial microarray platforMicroarray
The combination of two microarray platforms strengthens our database.
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