Sentence examples for microarray platforms corresponding from inspiring English sources

This algorithm integrates gene expression and survival data from 26 datasets on 12 different microarray platforms corresponding to approximately 17,000 genes in up to 4,738 samples.

PLANEX reports Pearson's correlation coefficients (PCCs; r-values) that distribute from a gene of interest for a given microarray platform set corresponding to a particular organism.

Probe annotation was downloaded from GEO for the corresponding microarray platforms and was used to identify the probes targeting RAD21 and c-Myc.

Genomic approaches in large animal models (canine, ovine etc) are challenging due to insufficient genomic information for these species and the lack of availability of corresponding microarray platforms.

To this end, the three data sets have been limited to the genes present on the corresponding microarray platforms and that map to these pathways as defined by the curated KEGG repository (Ogata et al. 1999) using their Entrez IDs.

For each microarray platform, a column corresponding to comparison with the 17-bp tag library and a column corresponding to the 20-bp tag library are shown.

In situ synthesized oligonucleotide arrays offered by Affymetrix are part of a turn-key system that includes both the DNA microarray platform and the corresponding bioinformatic tools.

ESTs/cDNAs sequences for each of the five SPS gene families and three different SPP gene families in wheat were blasted against the probesets available on the wheat 61 K microarray platform on which corresponding wheat SPSI to SPSV and SPP1 to SPP3 cDNA gene sequences were identified with a significant e value of 10-10 or higher.

Microarray platforms that utilize oligonucleotide DNA probes corresponding to predicted open reading frames (ORFs) have provided a reproducible approach to analyze changes in mRNA levels, allowing meaningful analyses of patterns of gene expression in a variety of cellular systems and model organisms [37].

(2) The miRNAs and target genes listed in TarBase are not updated according to the latest annotation, causing uncertainty when looking for corresponding probes on respective microarray platforms.

Identification of corresponding probesets in the microarray platforms of A. thaliana, rice, poplar, grapevine and citrus were performed using the BLAST software NCBI-BLAST-2.2.29+ NCBI-BLAST-2.2.29+ NCBI-BLAST-2.2.29+16s0100g00290) and Class II (VIT_16s0100g00290) SDH sequences with default settings.