Sentence examples for microarray platform including from inspiring English sources

The induction of TEL-AML1 results in binding to promoter regions of 2585 genes identified in ChIP experiments and also probed on the mRNA microarray platform, including granzyme B, a previously classified TEL-AML1 target.

The technology use transcript specific color coded molecular probe pairs to capture and count individual transcripts and has several advantages in comparison to microarray platform including easy protocols, less hands-on time and higher sample throughput [ 17].

The high correlation coefficients imply a high degree of technical reproducibility of the overall microarray platform, including the amplification step, and a lack of biological variation across different samples.

The first line in the table indicates that our microarray platform includes 40,539 informative probe-sets, with 43.67% of them displaying downregulation in the adult liver (without specifying a minimal threshold).

The resulting microarray platform includes 61655 probes, 50443 of which have chromosome coordinates (82%) and 44670 are annotated (72%).

No expression changes of CD8 were detected though the microarray platform included probes to alpha and beta chains whose performance was confirmed in studies with viral diseases including cardiomyopathy syndrome (CMS), heart and skeletal muscle inflammation (HSMI), and the infectious salmon anemia (ISA) (unpublished results).

We collected information from six rice microarray platforms, including the Affymetrix, Agilent 22K and 44K, BGI/Yale, and the NSF 20K and 45K, to construct the ROAD.

We have developed a simple probe-property-independent model, the global average model (GLAM), which we have used to predict absolute target concentration on different microarray platforms, including Affymetrix, Agilent, Illumina and a locally developed custom microarray.

We find that this sequence-independent model, characterized by only three free parameters, yields excellent predictions for four microarray platforms, including Affymetrix, Agilent, Illumina and a custom-printed microarray.

It also facilitated comparison of datasets across microarray platforms, including for identifying homologous cell types across species as we have pioneered [ 14, 24– 28].

Transcriptome analysis by this method has some significant advantages over microarray platforms, including analysis of polymorphisms in the coding sequence and the ability to detect novel transcripts.