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Analysis of microarray images was performed with ImaGene 6.0 software (BioDiscoveries) [ 73].
Analysis of microarray images was carried out applying the ImaGene 6.0 software (BioDiscoveries) [ 41].
Quality of microarray images was examined by inspection of FG and BG distribution of red (R) and green (G) channels in each slide.
The microarray chips were scanned using a Agilent Microarray Scanner (G2565CA) and analysis of the microarray images was done in Agilent's Feature Extraction Software (Version 10.5.1.1) using the one-color (GE1_105_Dec08) protocol.
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Microarray images were captured using an arrayWoRx® Biochip Reader (Applied Precision, Issaquah, WA, USA) using an exposure of 0.5 sec for each channel (Cy5 and Cy3) at ~10 um resolution.
Microarray images were analyzed with ImaGene software (BioDiscovery, Inc., Hawthorne, CA, USA), whereas the EMMA platform was used for data evaluation.
Microarray images were acquired by GSC 3000 laser scanner (Affymetrix).
Microarray images were analyzed with the BioDiscovery Imagene software package.
Microarray images were analyzed using Quantarray v3.0 software (PerkinElmer).
Affymetrix microarray images were interpreted by RMA [49], using Bioconductor in R [97], [98].
Microarray images were analysed by using Feature extraction software version A.8.5.1.1.
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