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Signals were extracted from microarray images using the Maia tool version 2.75 [ 53].
Data were extracted from the microarray images using Feature Extraction Software v8.5 (Agilent Technologies, USA).
Data were extracted from microarray images using Agilent Feature Extraction software (Agilent Technologies).
Data were extracted from microarray images using Agilent Feature Extraction software, version 9.5.1 (Agilent Technologies).
Slides data were extracted from the microarray images using Agilent Feature Extraction software, V.10.7.3.1 (http://www.agilent.com).
The intensity of each gene feature per array was extracted from scanned microarray images using Feature Extraction 9.5.1.1 software (Agilent Technologies) as described previously.
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Signal intensities for probes were obtained from the scanned microarray image using Agilent Technologies Feature Extractionn software version 10.5.1.1 (protocol GE1_105_Dec08).
Following hybridization and washing, microarrays were imaged using a DNA microarray scanner (agilent technologies) and array analysis and quality control were performed as described in [8].
Microarrays were imaged using an Agilent microarray scanner.
Microarrays were imaged using an Alphascan™ Microarray Imager (Alpha Innotech, San Leandro, CA, USA) and spot densitometry was performed by Thermo Fisher (Rockford, IL, USA) using ArrayVision™ Software (GE Healthcare, Piscataway, NJ, USA).
Numeric data was extracted from the two-channel hybridization images using the microarray image analysis software, BlueFuse (BlueGnome Ltd ,Cambridge).
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